Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVVGTPKSAEQIQQEWDTNPRWKDVTRTYSAEDVVALQGSVVEEHTLARRGAEVLWEQLHDLEWVNALGALTGNMAVQQVRAGLKAIYLSGWQVAGDANLSGHTYPDQSLYPANSVPQVVRRINNALQRADQIAKIEGDTSVENWLAPIVADGEAGFGG-ALNVYELQKALIAAGVAGSHWEDQLASEKKCGHLGGKVLIPTQQHIRTLTSARLAADVADVPTVVIARTDAEAATLITSDVDERDQPFITGERTREGFYRTKNGIEPCIARAKAYAP-FADLIWMETGTPDLEAARQFSEAVKAEYPDQMLAYNCSPSFNWKKHLDDATIAKFQKELAAMGFKFQFITLAGFHALNYSMFDLAYGYAQNQMSAYVELQEREFAAEERGYTATKHQREVGAGYFDRIATTVDPNSSTTALTGSTEEGQFH |
| 1XG4 Chain:A ((4-260)) | --------------------------------------------------SPGKAFRAALTKENPLQIVGTINANHALLAQRAGYQAIYLSGGGVAAGS----LGLPDLGISTLDDVLTDIRRITDVC------------------SLPLLVDADIGFGSSAFNVARTVKSMIKAGAAGLHIEDQVG-AKRSGHRPNKAIVSKEEMVDRIRAAVDAKT--DPDFVIMARTDALAV----------------------------EGLDAAIERAQAYVEAGAEMLFPEAI-TELAMYRQFADAVQ--VP---ILANITEFG--------ATPLFTTDELRSAHVAMALYPLSAFRAMNRAAEHVYNVLRQEGTQK-------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XG4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -118407 for 2208 contacts (-53.6/contact) +
2D Compatibility (PS) -27295 + (NN) -7146 + (LL) 11140
1D Compatibility (HY) -9600 + (ID) 3900
Total energy: -155208.0 ( -70.29 by residue)
QMean score : 0.506
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