Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKRPLRWLTEQITLAGMRPPISPQLLINRPAMQPVDLTGKRILLTGASSGIGAAATKQFGLHRAVVVAVARRKDLLDAVADRITGDGGTAMSLPCDLSDMEAIDALVEDVEKRIGGIDILINNAGRS-IRRPLAESLE--RWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEASPLF--SVYNASKAALSAVSRIIETEWGSQGVHSTTLYYPLVATPMIAPTKAYDGLPALTAAEAAEWMVTAARTRPVRIAPRVAVAVNALDSIGPRWVNALMQRRNEQLNP |
| 3RKR Chain:B ((27-198)) | -------------------------------------LSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPL-HTMKPAEW---DALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISS---LAGKNPVADGAAYTASK-------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RKR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96091 for 1174 contacts (-81.8/contact) +
2D Compatibility (PS) -16225 + (NN) -5710 + (LL) 10940
1D Compatibility (HY) -9600 + (ID) 3100
Total energy: -119786.0 ( -102.03 by residue)
QMean score : 0.514
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