Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKAKFQRTKPHVNIGTIGHVDHGKTTL-------TAAITKVLHDKFPDLNETKAFD---QIDNAPEERQRGITINIAHVEYQTDKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMPQTREHVLLARQVGVPYILVALNKADAVD-DEELLELVEMEVRELLAAQEFDEDAPVVRVSALKA----LEGDAKWVASVEELMNAVDESIPDPVRETDKPFLMPVEDVFTITGRGTVVTGRVERGVINVNEEVEIVGIRPSTT------KTTVTGVEMFRKLLDQGQAGDNVGLLLRGVKREDVERGQVV---TKPGTTTPHTE-FEGQVYILSKDEGGR--HTPFFNNYRPQFYFRTTDVTGVV------TLPEGTEMVMPGDNTNISVKLIQPVAMD------EGLRFAIREGGRTVGAGRVTKIIK |
| 3WY9 Chain:A ((5-426)) | ---------KPHVNIVFIGHVDHGKSTTIGRLLYDTGNIPETIIKKFE------SFKFAWVMDRLKEERERGITIDVAHTKFETPHRYITIIDAPGHRDFVKNMITGASQADAAVLVVAATDGVMPQTKEHAFLARTLGIKHIIVTINKMDMVNYDQKVFEKVKAQVEKLLKTLGY-KDFPVIPTSAWNGDNVVKKSDKMPWYNGPTLIEALDQ-IPEPEKPIDKPLRIPIQDVYSIKGVGTVPVGRVETGKLKVG---DVVIFEPASTIFHKPIQGEVKSIEMHHEPLQEALPGDNIGFNVRGVSKNDIKRGDVAGHTDKPPTVVRTKDTFKAQIIVLNHPTAITVGYSPVLHAHTAQIPVRFEQILAKVDPRTGNIVEENPQFIKTGDSAIVVLRPMKPVVLEPVKEIPQLGRFAIRDMGMTIAAGMVISIQK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WY9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -137113 for 2995 contacts (-45.8/contact) +
2D Compatibility (PS) -40817 + (NN) -15736 + (LL) 1564
1D Compatibility (HY) -27200 + (ID) 7650
Total energy: -226952.0 ( -75.78 by residue)
QMean score : 0.457
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