Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRSTPPASAGRSTPPALAGHSTPPALAGHSTLCGRPVAGD--RALIMAIVNRTPDSFYDKGATFSDAAARDAVHRAVADGADVIDVGGVKAGPGERVDVDTEITRLVPFIEWLRGAYPDQLISVDTWRAQVAKAACAAGADLINDTWGGVDPAMPEVAAEFGAGLVCAHTGGALPRTRPFRVSYGTTTRGVVDAVISQVTAAAERAVAAGVAREKVLIDPAHDFGKNTFHGLLLLRHVADLVMTGWPVLMALSNKDVVGETLGVDLTERLEGTLAATALAAAAGARMFRVHEVAATRRVLEMVASIQGVRPPTRTVRGLA |
| 3TYU Chain:B ((3-279)) | ----------------------------HMHLTARGLTLDLSRPQVMGILN------------NNLDQALQHAQRMLSAGATLIDIG--------------ELDRVVPVVEALAQRF-DVWLSVDTSKAAVITESAHAGAHLINDIRSLQEPGALEAAAKTGLPVCLMHMQ------------------DLMTDINRFFQHHIERCVAAGIAKNKLLLDPGFGFGKNLAHNYQLLAHLSELHHFELPLLVGMSRKSMVGQLLNVPPQQRVIGSVACAVIAAMQGAQIIRVHDVKETVEAMCIVEA-------TRSAK--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TYU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -145910 for 1894 contacts (-77.0/contact) +
2D Compatibility (PS) -26114 + (NN) -13522 + (LL) 1596
1D Compatibility (HY) -16000 + (ID) 4200
Total energy: -204150.0 ( -107.79 by residue)
QMean score : 0.421
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