Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSVWLRAGALVAAVMLSLSGCGGFHAGAPSTAGPCEIVPNGTPAPKTPPATVPSSRNLATNPEIATGYRRDMTVVRTAHYAAATANPLATQVACRVLRDGGTAADAVVAAQAVLGLVEPQSSGIGGGGYLVYFDARTGSVQAYDGREVAPAAATENYLRWVSDVDRSAPRPNARASGRSIGVPGILRMLEMVHNEHGRTPWRDLFGPAVTLADGGFDISARMGAAISDAAPQLRDDPEARKYFLNPDGSPKPAGTRLTNPAYSKTLSAIASAGANAFYSGDIAHDIVAAASDTSNGRTPGLLTIEDLAGYLAKRRQPLCTTYRGREIC-GMPSSGGVAVAATLGILEHFPMSDYAPSKVDLNGGRPTVMGVHLIAEAERLAYADRDQYIADVDFVRLPGGSLTTLVDPGYLAARAALISPQHSMGSAR--PGDFGAPTAVAPPVPEHGTSHLSVVDSYGNAATLTTTVESSFGSYHLVD--GFILNNQLSDFSAEPHATDGSPVANRVEPGKRPRSSMAPTLVFDHSSAGRGALYAVLGSPGGSMIIQFVVKTLVAMLDWGLNPQQAVSLVDFGAANSPHTNLGGENPEINTSDDGDHDPLVQGLRALGHRVNLAEQSSGLSAITRSEAG--WAGGADPRREGAVMGDDA |
2I3O Chain:D ((2-516)) | --------------------------------------FRSRPNALSQRSVIASS------------------------------SELASLAGRDILKRGGNIFDAALAVSA-LCVTQNNLCGLGGDLFALIRD-ENGQIDLNGSGQASRAVSIDYYESGLTKIPERGPYA-------AITVPGIAGSWDEIFRKFA-TDIADILEPAIRTASAGFPITQNYSDSIARSAPVIGQYRGWSSIF--PNGSVPVAGEILKQPDLAESFR-LSEEGFRSFYDGSLADIIIAGLEGTGSP-----LSDRDLRVYRPLIGKPVFTDLDEFRIYETSPNSQGITVIEWIRGESHGYDSRTWEAK------------IEDIFETE-EAYDKRRK-----------------ITDPSYNIAQH---DSANGKGLPKRDHNDIG------------DTTYFSISDSEGRSVSIIQSNYG-FGSGIVPKGTGFVLQNRGSYFTLQRDHPNALP-------GKRTFHTLAACVEKEH------DLYASLGSGGD---IQPQVQQILEILKDNTDPQAILDKPRWTEPYTIYEAPG----AVYVESEELYRNVSKQISGRKVVLRDVSQEFGTAQITTLIRGDVVVGAADPRGDGIAIPYS- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2I3O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -88642 for 4552 contacts (-19.5/contact) +
2D Compatibility (PS) -52174 + (NN) -22836 + (LL) 8304
1D Compatibility (HY) -15200 + (ID) 6250
Total energy: -176798.0 ( -38.84 by residue)
QMean score : 0.347
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