Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTTLAIVRLDPGLPLPSRAHDGDAGVDLYSAEDVELAPGRRALVRTGVAVAVPFGMVGLVHPRSGLATRVGLSIVNSPGTIDAGYRGEIKVALINLDPAAPIVVHRGDRIAQLLVQRVELVELVEVSSFDEAGLASTSRGDGGHGSSGGHASL
3C3I Chain:D ((2-131))
--SSLLVKKLVESATTPMRGSEGAAGYDISSVEDVVVPAMGRIAVSTGISIRVPDGTYGRIAPRSGLAYKYGIDVL--AGVIDSDYRGEVKVILYNT-TERDYIIKKGDRIAQLILEQIVTPGVAVVLD-----LSDTAR--------------
General information:
TITO was launched using:
RESULT:
Template:
3C3I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -94581 for 859 contacts (-110.1/contact) +
2D Compatibility (PS) -14606 + (NN) -11266 + (LL) -656
1D Compatibility (HY) -9200 + (ID) 2450
Total energy: -132759.0 ( -154.55 by residue)
QMean score : 0.451
(partial model without unconserved sides chains):
PDB file :
Tito_3C3I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3C3I-query.scw
PDB file :
Tito_Scwrl_3C3I.pdb
: