Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTARPLSELVERGWAAALEP--VADQVAHMGQFLRAEIAAGRRYLPAGSNVLRAFT-FPFDNVRVLIVGQDPYPTPGHAVGLSFSVAPDVRPWPRSLANIFDEYTADLG-YPLPSNGDLTPWAQRGVLLLNRVLTVRPSNPASHRGKGWEAVTECAIRALAARAAPLVAILWGRDASTLKPMLAAGNCVAIESPHPSPLSASRGFFGSRPFSRANELLVGMGAEPIDWRLP
3FCI Chain:A ((2-222))
-------EFFGESWKKHLSGEFGKPYFIKLMGFVAEERK-HYTVYPPPHQVFTWTQMCDIKDVKVVILGQDPYHGPNQAHGLCFSVQ-RPVPPPPSLENIYKELSTDIEDFVHPGHGDLSGWAKQGVLLLNAVLTVRAHQANSHKERGWEQFTDAVVSWLNQNSNGLVFLLWGSYAQKKGSAIDRKRHHVLQTAHPSPLSVYRGFFGCRHFSKTNELLQKSGKKPIDWKE-
General information:
TITO was launched using:
RESULT:
Template:
3FCI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -120190 for 1735 contacts (-69.3/contact) +
2D Compatibility (PS) -23517 + (NN) -14887 + (LL) 376
1D Compatibility (HY) -16800 + (ID) 4150
Total energy: -179168.0 ( -103.27 by residue)
QMean score : 0.531
(partial model without unconserved sides chains):
PDB file :
Tito_3FCI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FCI-query.scw
PDB file :
Tito_Scwrl_3FCI.pdb
: