Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTRVVLSVGSNLGDRLARLRSVADGLGD----ALIAASPIYEADPWGGVEQGQFLNAVLIADDPTCEPREWLRRAQEFERAAGRVRGQRWGPRNLDVDLIACYQTSATEALVEVTARENHLTLPHPLAHLRAFVLIPWIAVDPTAQLTVAGCPRPVTRLLAELEPADRDSVRLFRPSFDLNSRHPVSRAPES
1CBK Chain:A ((1-154))
MITAYIALGSNLNTPVEQLHAALKAISQLSNTHLVTTSSFYKSKPLGPQDQPDYVNAVAKIE-TELSPLKLLDELQRIENEQGRVRLRRWGERTLDLDILLY---------GNEIIQNERLTIPHYDMHNREFVIVPLFEIASDLVLP--NS-QIITELVKQFADHK-------------------------
General information:
TITO was launched using:
RESULT:
Template:
1CBK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -93882 for 1139 contacts (-82.4/contact) +
2D Compatibility (PS) -15864 + (NN) -4950 + (LL) 1976
1D Compatibility (HY) -12400 + (ID) 2100
Total energy: -127220.0 ( -111.69 by residue)
QMean score : 0.468
(partial model without unconserved sides chains):
PDB file :
Tito_1CBK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1CBK-query.scw
PDB file :
Tito_Scwrl_1CBK.pdb
: