Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLKITDDCINCDVCEPECPNGAISQGEEIYVIDPNLCTECVGHYDEPQCQQVCPVDCIPLDDANVESKDQLMEKYRKITGKA
2ZVS Chain:A ((2-65))
--LLITKKCINCDMCEPECPNEAISMGDHIYEINSDKCTECVGHYETPTCQKVCPIPNTIVKDPAHVETEEQLWDKFVLMHH-
General information:
TITO was launched using:
RESULT:
Template:
2ZVS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41949 for 424 contacts (-98.9/contact) +
2D Compatibility (PS) -6611 + (NN) -8115 + (LL) 284
1D Compatibility (HY) -6400 + (ID) 1850
Total energy: -64641.0 ( -152.46 by residue)
QMean score : 0.541
(partial model without unconserved sides chains):
PDB file :
Tito_2ZVS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZVS-query.scw
PDB file :
Tito_Scwrl_2ZVS.pdb
: