Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLQGKVALVTGASRGIGQAIALELGRLGAVVIGTATSASGAEKIAETLKANGVEGAGLVLDVSSDESVAATLEHIQQHLGQPLIVVNNAGITRDNLLVRMKDDEWFDVVNTNLNSLYRLSKAVLRGMTKARWGRIINIGSVVGAMGNAGQTNYAAAKAGLEGFTRALAREVGSRAITVNAVAPGFIDTDMTRELPEAQREALLGQIPLGRLGQAEEIAKVVGFLASDGAAYVTGATVPVNGGMYMS
1Q7B Chain:C ((2-243))
-NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANG---KGLMLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETLHVNGGMYM-
General information:
TITO was launched using:
RESULT:
Template:
1Q7B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -136091 for 2084 contacts (-65.3/contact) +
2D Compatibility (PS) -26061 + (NN) -10276 + (LL) 304
1D Compatibility (HY) -24800 + (ID) 7850
Total energy: -204774.0 ( -98.26 by residue)
QMean score : 0.595
(partial model without unconserved sides chains):
PDB file :
Tito_1Q7B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Q7B-query.scw
PDB file :
Tito_Scwrl_1Q7B.pdb
: