Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSRPQRISVLGATGSIGLSTLDVVQRHPDRYEAFALTGFSRLAELEALCLRHRPVYAVVPEQAAAIALQGSLAAAGIRTRVLFGEQALCEVASAPEVDMVMAAIVGAAGLPSTLAAVEAGKRVLLANKEALVMSGALFMQAVKRSGAVLLPIDSEHNAIFQSLPRNYADGLERVGVRRILLTASGGPFRETPLEQLASVTPEQACAHPNWSMGRKISVDSASMMNKGLELIEACWLFDAQPSQVEVVIHPQSVIHSMVDYVDGSVIAQLGNPDMRTPISYAMAWPERIDSGVSPLDMFAVGRLDFQRPDEQRFPCLRLASQAAETGGSAPAMLNAANEVAVAAFLERHIRFSDIAVIIEDVLNREAVTAVE--SLDQVLAADRRARSVAGQWLTRHAG
2Y1D Chain:A ((23-388))-----RVVVLGSTGSIGTQALQVIADNPDRFEVVGLAAGG--AHLDTL-LRQRAQTGVT-----NIAV----------DIPYHGSDAATRLVEQTEADVVLNALVGALGLRPTLAALKTGARLALANKESLVAGGSLVLRAA-RPGQIV-PVDSEHSALAQCLRGGTPDE-----VAKLVLTASGGPFRGWSAADLEHVTPEQAG----------NTLNSASLVNKGLEVIETHLLFGIPYDRIDVVVHPQSIIHSMVTFIDGSTIAQASPPDMKLPISLALGWPRRVSGAAAACDFHTASSWEFEPLDTDVFPAVELARQAGVAGGCMTAVYNAANEEAAAAFLAGRIGFPAIVGIIADVLHAADQWAVEPATVDDVLDAQRWAR------------


General information:
TITO was launched using:
RESULT:

Template: 2Y1D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -251104 for 3020 contacts (-83.1/contact) +
2D Compatibility (PS) -36382 + (NN) -15963 + (LL) 3316
1D Compatibility (HY) -25600 + (ID) 7950
Total energy: -333683.0 ( -110.49 by residue)
QMean score : 0.452

(partial model without unconserved sides chains):
PDB file : Tito_2Y1D.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2Y1D-query.scw
PDB file : Tito_Scwrl_2Y1D.pdb: