Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKEKFERNKPHVNVGTIGHVDHGKTTLTAAL--------------TKVCSDTWGGSARAFDQI-DNAPEEKARGITINTSHVEYDSAVRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMP-------QTREHILLSRQVGVPYIVVFLNKADMVD---DAELLELVEMEVRDLLNTYDFPGDDTPIIIGSALMALEGKDDNGIGVSAVQ------KLVETLDSYIPEPVRAIDQPFLMPIEDVFSISGRGTVVTGRVERGIIKVQEEVEIVGIKATTKTTCTGVEMFRKLLDEGRAGENVGILLRGTKREDVERGQV---LAKPGTIKPHTKFECEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGNC-------------ELPEGVEMVMPGDNIKMVVTLIAPIAMEDGL------RFAIREGGRTVGAGVVAKIIE |
| 3VMF Chain:A ((7-430)) | ---------KPHMNLVVIGHVDHGKSTLVGHLLYRLGYIEEKKLKELEEQAKSRGKESFKFAWILDKMKEERERGITIDLTFMKFETKKYVFTIIDAPGHRDFVKNMITGASQADAAILVVSARKGEFEAGMSTEGQTREHLLLARTMGIEQIIVAVNKMDAPDVNYDQKRYEFVVSVLKKFMKGLGYQVDKIPFIPVSAW-----KGDNLIERSPNMPWYNGPTLVEALDQLQP-PAKPVDKPLRIPVQNVYSIPGAGTVPVGRVETGVLRVGDKV--VFMPPGVVGEVRSIEMHYQQLQQAEPGDNIGFAVRGVSKSDIKRGDVAGHLDKPPTVA--EEFEARIFVIWHPSA-----ITVGYTPVIHVHTASVSSRIIEIKAKLDPKTGQVVEQNPQFLKAGDAAIVRFKPVKPLVVEKFSEIPQLGRFAMRDMNRTVGIGIVTDV-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VMF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -153432 for 3112 contacts (-49.3/contact) +
2D Compatibility (PS) -39975 + (NN) -18055 + (LL) 1808
1D Compatibility (HY) -27200 + (ID) 6950
Total energy: -243804.0 ( -78.34 by residue)
QMean score : 0.422
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