Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSLLDIKNLSVRFGDTTAVPVV-DGLDLSVDKGEVLAIVGESGSGKSVTMMALMGLIDAPGWVSADHLRFDGHDMLTLKGRQRRRIVG---KDMAMVFQ---DPMTALNPSYTVGYQIEEVLRLHLGLRGKALRQRALELLERVEIPAAASRLDAYPHQLSGGMSQRVAIAMAIAAEPKLLIADEPTTALDVTIQAQIMELLLNLQRDQDMALILITHDLAVVAETAQRVCVMYAGEAVEIGGVPALFDRPTHPYTEALIKAIPEHCAGEARLATLPGIVPGRYDRPRGCLLSPRCPYAQEHCRQERPALETHERGAVRCFYPLNLLNEVA |
2FGJ Chain:D ((7-239)) | ----DITFRNIRFRYKPDSPVILDNINLSIKQGEVIGIVGRSGSGKS-TLTKLIQRFYIP---ENGQVLIDGHDLALADPNWLRRQVGVVLQDNVLLNRSIIDNISLANP----GMSVEKVI---YAAKLAGAHDFISELRE-----GYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYESEHVIMRNMHKICKGR--TVIIIAARLSTV-KNADRIIVMEKGKIVEQGKHKELLSEPESLYS--------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FGJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -141464 for 1716 contacts (-82.4/contact) +
2D Compatibility (PS) -24083 + (NN) -9197 + (LL) 7048
1D Compatibility (HY) -13200 + (ID) 3950
Total energy: -184846.0 ( -107.72 by residue)
QMean score : 0.385
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