Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSELNLTTDEARVSYGIGRQLGDQLRENPVPGMTLDAVLAGLSDAFAGIDSRVSGEALSASFQVIRERMQAEAQAKAEAAAGEGRAYLAENAKREGVTVLPSGLQFEVLSTGEGAK-PSREDTVRTHYHGTLIDGTVFDSSYQ-------RGQPAEFPVG--GVIAGWVEALQLMNAGSKWRLHVPSELAYG--GQAVGSIPPHSVLVFDVELLEIL |
| 1PBK Chain:A ((7-115)) | -----------------------------------------------------------------------------------------------------------VLKKGDKTNFPKKGDVVHCWYTGTLQDGTVFDTNIQTSAKKKKNAKPLSFKVGVGKVIRGWDEALLTMSKGEKARLEIEPEWAYGKKGQPDAKIPPNAKLTFEVELVDI- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PBK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -46670 for 678 contacts (-68.8/contact) +
2D Compatibility (PS) -10400 + (NN) -1119 + (LL) 7564
1D Compatibility (HY) -7600 + (ID) 2400
Total energy: -60625.0 ( -89.42 by residue)
QMean score : 0.462
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