Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIQRVYVALGSNLAEPREQIQAALDAFERLPETRLVAVSPLYISDPLGPADQPRFVNGVAALDTNLAPLDLLDALQAIELEQGRVR-DLRWGPRTLDLDILLFGEQLLDLPRLKVPHYHMQARAFVLYPLADLAPDLRLPDGRHLPELLAACPFEGIERLPGA
1CBK Chain:A ((1-160))
-MITAYIALGSNLNTPVEQLHAALKAISQLSNTHLVTTSSFYKSKPLGPQDQPDYVNAVAKIETELSPLKLLDELQRIENEQGRVRL-RRWGERTLDLDILLYGNEIIQNERLTIPHYDMHNREFVIVPLFEIASDLVLPNSQIITELVKQFADHKMIKLNP-
General information:
TITO was launched using:
RESULT:
Template:
1CBK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -113888 for 1235 contacts (-92.2/contact) +
2D Compatibility (PS) -16716 + (NN) -8940 + (LL) 276
1D Compatibility (HY) -18000 + (ID) 4050
Total energy: -161318.0 ( -130.62 by residue)
QMean score : 0.676
(partial model without unconserved sides chains):
PDB file :
Tito_1CBK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1CBK-query.scw
PDB file :
Tito_Scwrl_1CBK.pdb
: