Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRPLVATVDLSAIRHNYALAKR-CAPQRQAFAVVKANAYGHGAREVVTALHD-DADGFAVACLEEAAEVRALHASARILLLEGCFEASEYALAGQLRLDLVIQGAEQGEAFLAA-GLDIPLNVWLKLDSGMHRLGF-DPAALRAWHARLRSHPGVRELNLISHFACADERNHPLTEQQLESFLGL---LDLDFDQRSLANSAAVLTIPAAHMDWLRPGIMLYGSTPLADLSAA-ELGLKPAMSLGAQLISLREVAVGESVGYGATWIAERPARIGTVSCGYADGYPRTAPAGTPVLVGGRRAILAGRVSMDMLAVDLSDLPEARVGDPVELWGAGLSVDEVARACGTLGYELLSKVTARVPRRYSH |
1BD0 Chain:A ((12-244)) | -------VDLDAIYDNVENLRRLLPDDTHIMAVVKANAYGHGDVQVARTALEAGASRLAVAFLDEALALREKGIEAPILVLGA-SRPADAALAAQQRIALTVFRSDWLEEASALYSGPFPIHFHLKMDTGMGRLGVKDEEETKRIVALIERHPHFVLEGLYTHFATADEVNTDYFSYQYTRFLHMLEWLPSRPPLVHCANSAASLRFPDRTFNMVRFGIAMYGLAPSPGIKPLLPYPLKEA----------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1BD0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -130859 for 1858 contacts (-70.4/contact) +
2D Compatibility (PS) -24132 + (NN) -6349 + (LL) 8420
1D Compatibility (HY) -14000 + (ID) 4000
Total energy: -170920.0 ( -91.99 by residue)
QMean score : 0.472
|
|
|