Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKGHSLQDPYLNTLRKERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAISTVVPSRPVRLPSGDQPAEPGNA
3GIB Chain:C ((5-66))
-----SLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAISTVVPSRP---------------
General information:
TITO was launched using:
RESULT:
Template:
3GIB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44647 for 375 contacts (-119.1/contact) +
2D Compatibility (PS) -6725 + (NN) -880 + (LL) 148
1D Compatibility (HY) -10400 + (ID) 2950
Total energy: -65454.0 ( -174.54 by residue)
QMean score : 0.534
(partial model without unconserved sides chains):
PDB file :
Tito_3GIB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GIB-query.scw
PDB file :
Tito_Scwrl_3GIB.pdb
: