Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQRSLLFALLATLLLVGGARAETDPDYSMVLLTENFPPYNMAINGKNFAQEDNIDGIAVDIVREMFKRAGIKYSLTL----------------RFPWDRIYKLALEKPGYGVFVTARL-AEREDKFKWVGPIGPDDWVLLAKGDSPIT----LGSLDEAKKYRIGAYKGDAIAEFLGKNGFEADLALR--------DQENAQKLVKGQIDLWASGDPAGRYLAKQEGVTGLKTVLRFNSDQLY-LALNRETPDEVVQKLQAALDGMRKEGFVEDILNSYL------- |
| 1PB7 Chain:A ((4-292)) | --TRLKIVTIHQEPFVYVKPTMSDGTCKEEFTVNGDPVKKVICTGPNHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKGTRITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKC--DLVTTGELFFRSGFGIGMRKDSPW--KQNVSLSILKSHENGFMEDLDKTWVRYQECDS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PB7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -116066 for 1869 contacts (-62.1/contact) +
2D Compatibility (PS) -26679 + (NN) -14182 + (LL) 868
1D Compatibility (HY) -10400 + (ID) 1650
Total energy: -168109.0 ( -89.95 by residue)
QMean score : 0.349
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