Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIYTVTLNPSIDFIVRLDTLLLGSVNRMTSDDKYVGGKGINVSRILKRLKIDNTATGFIGGFTGHFVEDGLVSEGIKTDFVSVNEDTRINVKVKAK-IETEINGGGPRITN----EQLHRLEKLLSRLTPEDTVVFAGSAPASLGNKVYNTLIPIAKKTGAEVVCDFEGQT---LLDALAYQPLLVKPNNHELADIFGVELEG-LPDIEKYAHKILDKGAKNVIVSMAGDGALLVTPEASYFAKPIKGEVKNSVGAGDSMVAGFTGEFVKSKNPVEALKWGVACGTATTFSDD--LATAEFIQDIYNKVEVEKL |
2JG1 Chain:A ((21-330)) | MILTLTLNPSVDISYPLTALKLDDVNRVQEVSKTAGGKGLNVTRVLAQVGEPVLASGFIGGELGQFIAKKLDHADIKHAFYNIKGETRNCIAILHEGQQTEILEQGPEIDNQEAAGFIKHFEQMMEK---VEAVAISGSLPKGLNQDYYAQIIERCQNKGVPVILDCSGATLQTVLENP-YKPTVIKPNISELYQLLNQPLDESLESLKQAVSQPLFEGIEWIIVSLGAQGAFAKHNHTFYRVNIPTISVLNPVGSGDSTVAGITSAILNHENDHDLLKKANTLGMLNAQEAQTGYVNLNNYDDLFNQIEVLEV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JG1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -124901 for 2485 contacts (-50.3/contact) +
2D Compatibility (PS) -31736 + (NN) -1473 + (LL) 232
1D Compatibility (HY) -21200 + (ID) 4750
Total energy: -183828.0 ( -73.98 by residue)
QMean score : 0.508
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