Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNHQILQNYINSHNLPIIEKDYHKYLTFESLEEDYTYILKDGIVKQSVLSKYGTEFNLRYVTGLEITSILNTDYSQHMGEPYNVRIES-ETAHFYKVRRSTFLKDINNDIELQGYVKDFYHNRLEKSMKKMQCMLTNGRIGAISTQLYDLSKMFGEERDNGDIYINFVITNEELGKFCGISTGSSVSRILKQLKDDHIIRIEKQHIIITNVEKLKDHIVF |
1O3T Chain:A ((2-200)) | PTLEWFLSHCHIHKYP-----SKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQ---GDFIGELGLFEEGQERSAWVRAKTACEVAEISYKKFRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTHPDGMQIK--ITRQEIGQIVG-CSRETVGRILKMLEDQNLISAHGKTIVVYG---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1O3T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -57130 for 1414 contacts (-40.4/contact) +
2D Compatibility (PS) -20732 + (NN) 390 + (LL) 2608
1D Compatibility (HY) -7600 + (ID) 1800
Total energy: -84264.0 ( -59.59 by residue)
QMean score : 0.348
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