Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRVFYDKDCDLSIIQG-KKVAIIGYGSQGHAHACNLKDS------GVDVTVGLRSGSATVAKAEAHGLKV-----ADVKTAVAAADVVMILTPDEFQGRLYKEEIEPNLKKGATLAFAHGFSIHYNQ---VVPRADLDVIMIAPKAPGHTVRSEFVKG-----GGIPDLIAIYQDASGNAKNVALSYACGVGGGRTGIIETTFKDETETDLFGEQAVLCGGCVELVKAGFETLVEAGYAPEMAYFECLHELKLIV-DLMYEGGIANMNYSISNNAEYGEYVTGPEVINAESR-------AAMRNALKRIQDGEYAKMFITEGA-----ANYPSMTAYRRNNAAHPIEQIGEKLRAMMPWIAANKIVDKSKN |
| 3FR7 Chain:A ((48-385)) | ----------PEAFKGIKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEARAAGFTEESGTLGDIWETVSGSDLVLLLISDAAQADNYEK-IFSHMKPNSILGLSHGFLLGHLQSAGLDFPKNISVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATDVALGWSVALGSP--FTFATTLEQEYKSDIFGERGILLGAVHGIVEALFRRYTEQGMDEEMAYKNTVEGITGIISKTISKKGMLEVYNSLTEE--------GKKEFNKAYSASFYPCMDILYECYEDVASGSEIRSVVLAGRRFYEKEGLPAFP--MGNIDQTRMWKVGEKVRSTRPEND---------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3FR7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -147973 for 2286 contacts (-64.7/contact) +
2D Compatibility (PS) -32541 + (NN) -5799 + (LL) 2184
1D Compatibility (HY) -19600 + (ID) 4500
Total energy: -208229.0 ( -91.09 by residue)
QMean score : 0.525
|
|
|