Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLAARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREIRQHKLRKLNPPDESGPGCMSCKCVLS
3CON Chain:A ((19-185))
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAG-----------MRTGEGFLCVFAINNSKSFADINLYREQIKRVKDSDDVPMVLVGNKCDLPTRTVDTKQAHELAKSYGIPFIETSAKTRQGVEDAFYTLVREIRQYR----------------------
General information:
TITO was launched using:
RESULT:
Template:
3CON.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101702 for 1292 contacts (-78.7/contact) +
2D Compatibility (PS) -17350 + (NN) -7189 + (LL) 1404
1D Compatibility (HY) -22000 + (ID) 7050
Total energy: -153887.0 ( -119.11 by residue)
QMean score : 0.680
(partial model without unconserved sides chains):
PDB file :
Tito_3CON.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CON-query.scw
PDB file :
Tito_Scwrl_3CON.pdb
: