Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALKSLVVLPLLVLVLLLVRVQPSLGKESAAAKFERQHMDSGNSPSSSSNYCNLMMCCRKMTQGKCKPVNTFVHESLADVKAVCSQKKVTCKNGQTNCYQSKSTMRITDCRETGSSKYPNCAYKTTQVEKHIIVACGGKPSVPVHFDASV
3EV3 Chain:B ((1-124))
--------------------------KETAAAKFERQHMDS-----SSSNYCNQMMKSRNLTKDRCKPVNTFVHESLADVQAVCSQKNVACKNGQTNCYQSYSTMSITDCRETGSSKYPNCAYKTTQANKHIIVACEGNPYVPVHFDASV
General information:
TITO was launched using:
RESULT:
Template:
3EV3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40819 for 847 contacts (-48.2/contact) +
2D Compatibility (PS) -13248 + (NN) -9627 + (LL) 2592
1D Compatibility (HY) -11600 + (ID) 5000
Total energy: -77702.0 ( -91.74 by residue)
QMean score : 0.393
(partial model without unconserved sides chains):
PDB file :
Tito_3EV3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EV3-query.scw
PDB file :
Tito_Scwrl_3EV3.pdb
: