Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVRPLNCIVAVSQNMGIGKNGDLPWPPLRNEFQYFQRMTTVSS-------------------VEGKQNLVIMGRKTWFSIPEKNRPLKDRINIVLSRELKEP--PKGAHFLAKSLDDALELIEDPELTNKVDVVWIVGGSSVYKEAMNKPGHVRLFVTRIMQEFESDAFFPEIDFEKYKLLPEYPGVPLDVQEEKGIKYKFEVYEKNN
2BL9 Chain:A ((24-238))
-AGTKNEPFSPRTFRGLGNKGTLPWKCNSVDMKYFSSVTTYVDESKYEKLKWKRERYLRMEA--KLQNVVVMGRSSWESIPKQYKPLPNRINVVLSKTLTKEDVKEKV-FIIDSIDDLLLLLKK----LKYYKCFIIGGAQVYRECLSRNLIKQIYFTRINGAYPCDVFFPEFDESEFRVTS-----VSEVYNSKGTTLDFLVYSKV-
General information:
TITO was launched using:
RESULT:
Template:
2BL9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61547 for 1158 contacts (-53.1/contact) +
2D Compatibility (PS) -18445 + (NN) -7023 + (LL) 736
1D Compatibility (HY) -14000 + (ID) 2950
Total energy: -103229.0 ( -89.14 by residue)
QMean score : 0.473
(partial model without unconserved sides chains):
PDB file :
Tito_2BL9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BL9-query.scw
PDB file :
Tito_Scwrl_2BL9.pdb
: