Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVIMGRHTWESIGRPLPGRKNIILSSQPGT-DDRVTWVKSVDEAIAACGDVPEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFSEFHDADAQNSHSYCFEILERR
3TQ8 Chain:A ((3-161))
-ITLIAAMDKNRLIGRNNELPWHLPADLAHFKSITLGKPIVMGRRTFDSIGKPLPHRRNIVITQQKNLIIEGCDIFYSLDDALSALTKEPEVIIIGGARIFKEALPKADKMILTIINHSFEGDVYFPEWNDKEWKITSQIKHERD--NPYPFQFLELRRL
General information:
TITO was launched using:
RESULT:
Template:
3TQ8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -115294 for 1175 contacts (-98.1/contact) +
2D Compatibility (PS) -17158 + (NN) -10293 + (LL) 472
1D Compatibility (HY) -14000 + (ID) 3350
Total energy: -159623.0 ( -135.85 by residue)
QMean score : 0.761
(partial model without unconserved sides chains):
PDB file :
Tito_3TQ8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TQ8-query.scw
PDB file :
Tito_Scwrl_3TQ8.pdb
: