Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEGTESEMETPSAINGNPSWHLADSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIAAWMATYLNDHLEPWIQENGGWDTFVELYGNNAAAESRKGQERFNRWFLTGMTVAGVVLLGSLFSRK
3SP7 Chain:A ((4-162))
MSQSNRELVVDFLSYKLSQKGYSWSQFSD----------------------------------------------------ESEAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIAAWMATYLNDHLEPWIQENGGWDTFVELYGNNA----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3SP7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106817 for 1076 contacts (-99.3/contact) +
2D Compatibility (PS) -15665 + (NN) -4946 + (LL) 4556
1D Compatibility (HY) -21200 + (ID) 7200
Total energy: -151272.0 ( -140.59 by residue)
QMean score : 0.377
(partial model without unconserved sides chains):
PDB file :
Tito_3SP7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3SP7-query.scw
PDB file :
Tito_Scwrl_3SP7.pdb
: