Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQGLLILSVLLGAALGKEDFVGHQVLRITAADEAEVQTVKELEDLEHLQLDFWRGPGQPGSPIDVRVPFPSLQAVKVFLEAHGIRYRIMIEDVQSLLDEEQEQMFASQSRARSTNTFNYATYHTLDEIYDFMDLLVAEHPQLVSKLQIGRSYEGRPIYVLKFSTGG---SNRPAIWIDLGIHSREWITQATGVWFAKKFTEDYGQDPSFTAILDSMDIFLEIVTNPDGFAFTHSQ--NRLWRKTRSVTSSSLCVGVDANRNWDAGFGK-AGASSSPCSETYHGKYANSEVEVKSIVDFVKDH-----GNFKAFLSIHSYSQLLLYPYGYTTQSIP------DKTELNQVAKSAVEALKSLYGTSYKYGSIITTIYQASGGSIDWSYN-QGIKYSFTFELRDT-GRYGFLLPASQIIPTAQETWLGVLTIMEHTLNNLY |
| 4IHM Chain:A ((4-314)) | --------------------------------------------------------------------------------------------------------------------SYDSGYHNYNEMVNKINTVASNYPNIVKKFSIGKSYEGRELWAVKISDNVGTDENEPEVLYTALHHAREHLTVEMALYTLDLFTQNYNLDSRITNLVNNREIYIVFNINPDGGEYDISSGSYKSWRKNRQPNSGSSYVGTDLNRNYGYKWGCCGGSSGSPSSETYRGRSAFSAPETAAMRDFINSRVVGGKQQIKTLITFHTYSELILYPYSYTYTDVPSDMTQDDFNVFKTMANT----MAQTNG--YTPQQGS-DLYIADGGMD-WAYGQHKI-FAFTFEMYPTSYNPGFYPPDEVIGRETSRNKEAVLYVAEKADC--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IHM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -152985 for 2591 contacts (-59.0/contact) +
2D Compatibility (PS) -31059 + (NN) -11421 + (LL) 10140
1D Compatibility (HY) -14400 + (ID) 4700
Total energy: -204425.0 ( -78.90 by residue)
QMean score : 0.539
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