Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMKITISKVLPDFETLVVGLFEDGELVSNGKVLQDKQIINSIK--KFSHFNGGFG---EFFSVTLSDGKNVI---IVGLGKRDEWNENKELSVGGKIYCELGRLKIKQATVSIEGSAENIAYGAFLRSFKFDKYKTKKDEEITEVEEIMVLAKDEQL----NDAE---KSFEHLRQEGEGIFLARTFITEPPNVLYPESYADCIKSELTKFGLEIEVLDKKQMEKKKMGALLGVAQGSSKEPKLVVIRWNGASKEQKPIAFVGKGITFDTGGVSLK--PSRGMESMKYDMAGSAAVVGVMRTLAGRKA-RINAVGVVALAENAIDGNAQRPSDVVTSMSGQTIEVLNTDAEGRLVLADALWYTQDRFAPEFMIDLATLTGAIVVALGNNEYAGLFSNNDELANRLVEAGNEANEKLWRFPMNETYDKIIDSPIADVQNIAPTGSGGDSIMAAQFLQRFVNDTCWAHLDIAGTAWHEKGTDISPKGAVGFGVRLLNKLVEKYYETSD |
| 4R7M Chain:B ((55-517)) | ---------------------ENGPVKISSKV-NDKQVSEFLKDENMEKFNVKLGTSKHFY--MFNDNKNSVAVGYVGCGSVADLSEADMKRVVLSLVTMLHDNKLSKLTVVFEINVDKNLFRFFLETL-FYEYMT--DERFKSTDK----EYIKHLGVYINNADTYKEEVEKARVYYFGTYYASQLIAAPSNYCNPVSLSNAAVELAQKLNLEYKILGVKELEELKMGAYLSVGKGSMYPNKFIHLTYKSKGDVKKKIALVGKGITFDSGGYNLKAAPGSMIDLMKFDMSGCAAVLGCAYCVGTLKPENVEIHFLSAVCENMVSKNSYRPGDIITASNGKTIEVGNTDAEGRLTLADALVYAE-KLGVDYIVDIATLTGAMLYSLGTS-YAGVFGNNEELINKILQSSKTSNEPVWWLPIINEYRATLNSKYADINQIS-SSVKASSIVASLFLKEFVQNTAWAHIDIAGVSWNFKAR--KPK---GFGVRLLTEFVL------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R7M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -199930 for 3810 contacts (-52.5/contact) +
2D Compatibility (PS) -46960 + (NN) -17348 + (LL) 4084
1D Compatibility (HY) -39200 + (ID) 8300
Total energy: -307654.0 ( -80.75 by residue)
QMean score : 0.492
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