Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQDTVLVLQDGKCFLGKSIGKKGKCIGEICFTTGITGYQHTITDPSFADQIIMFTFPHVGNVGINDKDNEGKKIFASGVIMRELSPASHPSSYVSLSDWLEKSNLVGISGVDTRALTRHLRKHGPQNGIICPLIHSNVTTVCNTCTYDDQAILVIKGLLDELKKHKPVNGIEITDRVSLNNNFKSDLNAKYKVAVVDFGI--KASIVSRLIELDCAIELIKPDRGFAQKILSMCPDGIVLSNGPGDPQEIGKSVTPEIDVIVKSKIPILGICMGHQLLAITLGAKTIKMNVGHRGSNHPVYNVS-------SDKVEITSQNHGFVFDPSSLPNNVEVTHISMFDNSIEGIMAKDYPVFSVQYHPEEAPGTHDSHYLFRRFIDNIALYKVKSA |
| 2A9V Chain:A ((12-206)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HMLKIYVVDNGGQWTHREWRVLRELGVDTKIVPNDI-DSSEL--DGLDGLVLSGGAPNIDEELDKLGSVGKYIDDHNYPILGICVGAQFIALHFGASVVKAKHPEFGK-TKVSVMHSENIFGGLPSEITVWENHNDEII--NLPDDFTLAASS-ATCQVQGFYHKTRPIYATQFHPEVEHTQ-YGRDIFRNFIGICASYREIQK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2A9V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -112315 for 1578 contacts (-71.2/contact) +
2D Compatibility (PS) -20102 + (NN) -9634 + (LL) 9596
1D Compatibility (HY) -8400 + (ID) 2450
Total energy: -143305.0 ( -90.81 by residue)
QMean score : 0.525
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