Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEMSVTEVIFSFLGGLGIFLYGLKIMGDGLQASAGDRLRDILNKFTSNPVLGVIAGIVVTILIQSSSGTTVITIGLVTAGFMTLKQAIGVIMGANIGTTVTAFIIGIDLGEYAMPILALGAFLIFFFKRSKINNIGRILFGFGSLFFGLEFMGDAVKPLASLDGFKQLMLDMSSNPILAVIVGAGLTALVQSSSATIGILQEFYQQDLISLNAAIPVLLGDNIGTTITAILASLAGSIAAKRAALVHVIFNLIGVIIFTIFLPVVIHLISLLQDVWHLKPAMTIAVSHGIFNITNTLIQLPFVAGLAWIVTKLVPGKDIADDYKPQHLNKDLVYHAPGVALQETQKELQNVGQIVLSMFEDIREI-TKDDKKLIKKLEQKHQAVETINDSIRNYLVRI-STKAITKADVERLAVMFDVNRSILKVAELTEEYVAQLKRQHDEDIRITEDAQRGMDKLFNHVAESFDKAIDMLDVYDKTKKDEIVERSRESFNIEHKLRKGHIKRLNRGECTTKGGLLYIDMIGVLERIGYHSRNVSEALVGLNDDVPTDEEIATTEI |
1XWM Chain:A ((8-211)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DLASLHNKLIEMGRLTEVALQQAIEAFQTQNANLAMAVIDGDGSIDALEEEVNDFALWLIAAQQPVATDLRRIVAAIKIASDIERIADFAVNIAKACIRIG--GQPFV-MDIGPLVLMYRLATDMVSTAIAAYDREDASLAAQIADMDHRVDEQYGEMMASLLAVAKTDAATLAQMNVLALVARYIERTADHATNIAEHLVYLVKGK----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XWM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -45115 for 1585 contacts (-28.5/contact) +
2D Compatibility (PS) -21680 + (NN) -10015 + (LL) 27620
1D Compatibility (HY) -5200 + (ID) 1200
Total energy: -55590.0 ( -35.07 by residue)
QMean score : 0.502
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