Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKIFDYEDIQLIPNKCIVESRSECDTTIQFGPK-KFKLPVVPANMQTVMNEKLAKWFAENDYFYIMHR---FDEEAR-IPFIKHMQNSGLFASISVGVKKAEFDFIEKLAQEKLIPEYITIDIAHGHSDSVINMIKHIKNHIPDSFVIAGNVGTPEGVRELENAGADATKVGIGPGRVCITKIKTGFGTGGWQLAALNICSKAARK---PLIADGGIRTHGDIAKSIRFGASMVMIGSLFAAHEESPGETVELDGKQYKEYFGSAS-----EFQKGEHKNV-EGKKMFVEHKGSLMDTLKEMQQDLQSSISYAGGKDLKSLRTVDYVIVRNSIFNGDRD |
4Q32 Chain:D ((12-339)) | ---YTFDDVLLVPNKSEVLP-NEVSLKTQLTKKIQLNIPLMSASMDTVTESKMAIAMAREGGIGIIHKNMTIEDQAREVDRVK--RSGGLLCGASIGVTNDMMERVDAVVKAKV--DVIVLDTAHGHSKGVIEGVKRIKAKYPELQVIAGNIATPEAVRDLAEAGADCVKVGIGPGSICTTRIVAGVGV--PQLTAVMDCAEEGKKLGIPVIADGGLKYSGDIVKALAAGACAAMMGSIFAGCEEAPGAIEIYQGRSYKVYRGMGSLGAMA---------VPEGVEGRIAYKGHLADTIYQLIGGIKSGMGYLGAPTLENLYENANFVVQTS------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q32.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -154665 for 2677 contacts (-57.8/contact) +
2D Compatibility (PS) -32663 + (NN) -10560 + (LL) 960
1D Compatibility (HY) -20400 + (ID) 5750
Total energy: -223078.0 ( -83.33 by residue)
QMean score : 0.465
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