Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRYTKSEEAMKVAETLMPGGVNSPVRAFKSVDTPAIFMD-HGKGSKIYDIDGNEYIDYVLSWGPLILGHRDPQVISHLHEAIDKGTSFGASTLLEN----KLAQLVIDRVPSIEKVRMVSSGTEATLDTLRLARGYTG------RNKIVKFEGCYHGHSDSLLIKAGSGVATLGLPDSPGVPEGIAKNTITVPYNDLDALKIAFEKFGDDIAGVIVEPVAGNMGVVPPIEGFLQGLRDITTEYGALLIFDEVMTGF-RVGYHCAQGYFGVTPDLTCLGKVIGGGLPVGAFGGKKEIMD--HIAPLGNIYQAGTLSGNPLAMTSGYETLSQLTPETYEYFNMLGDILEDGLKRVFAKHNVPITVNRAGSMIGYFLNEGPVTNFEQANKSDLKLFAEMYREMAKEGVFLPPSQFEGTFLSTAHTKEDIEKTIQAFDTALSRIVK |
| 2PB2 Chain:A ((39-306)) | ----------------------------------ADFIPVKGKGSRVWDQQGKEYIDFAGGIAVTALGHCHPALVEALKSQGE--TLWHTSNVFTNEPALRLGRKLIDATFA-ERVLFMNSGTEANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPA-------DIIHVPFNDLHAVKAVMD---DHTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLFAYMHYGVTPDILTSAKALGGGFPVSAMLTTQEIASAF----HGSTY-----GGNPLA-------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PB2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -98719 for 2040 contacts (-48.4/contact) +
2D Compatibility (PS) -27501 + (NN) -12018 + (LL) 11488
1D Compatibility (HY) -12400 + (ID) 4900
Total energy: -144050.0 ( -70.61 by residue)
QMean score : 0.495
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