Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRNDLETLKHIIDSSNRITFFTGAGVSVASGVPDFRSMG-GLFDEISKDGLS-PEYLLSRDYLEDDPEGFINFCHKRLLFVDTKPNIVHDWIAKLERNQQSLGVITQNIDGLHSDAG--SQHVDELHGTLNRFYCNACHKSYT----KSDVIDRTLKHCDNCGGAIRPDIVLYGEMLDQPTIIRALNKIEHADTLVVLGSSLVVQPAAGLISHFKGD-NLIIINKDRTPYDSDATLVIHDDMVSVVKSLMTE |
| 4BVG Chain:A ((21-231)) | -------------ACQRVVVMVGAGISTPSGIPDFRSPGSGLYSNLQQYDLPYPEAIFELPFFFHNPKPFFTLA-KELYPGNYKPNVTHYFLRLLHDKGLLLRLYTQNIDGLERVSGIPASKLVEAHGTFASATCTVCQRPFPGEDIRADVMADRVPRCPVCTGVVKPDIVFFGEPLPQRFLLHVVD-FPMADLLLILGTSLEVEPFASLTEAVRSSVPRLLINRD-------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BVG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -87019 for 1526 contacts (-57.0/contact) +
2D Compatibility (PS) -21786 + (NN) -7801 + (LL) 3124
1D Compatibility (HY) -18000 + (ID) 3450
Total energy: -134932.0 ( -88.42 by residue)
QMean score : 0.450
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