Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLSIGGLVDDASLTKFENPTIVEFRHIKKFITEYNALDHRPFTEKNDIEVAHEAQKNAAIVKGNDLYRFFSKLKQWAGADEKQNFRDLEEDFSLESFTHCTDFNPIEIYAYCISRSINNMENGVFLKYFLSYPIKYEKH-----QAEKIRESFERGLKKSLPRHVFDDEKTAKTFKVELRASEPCAYAISALKSYGFFKSEKLDKPVYYGVFDFGGGTTDFDFGKWEKRASPKFAYKMTHFSSGGDKYLGGENLLELLAWETYAKNFQTLKEKDIVIAKPNYDRIDTQLFGSFMQNSSGVRLNLQTIASQLRPFLENLDANIIEAIEENENFEIKGFEKDFKAMLFDRNGVETECDLKVDCKELLNLLKGKIEDGVANFFAGFSKVMAENIDDQCRAFHIFLGRNVSRSALVKQAFENAKEKQLKDYHQKTSKNDFKFIIYEPLGTEKSDKQILELTGEDVSNTPAYLKPTCKTGVAFGLLESRDKAQGIEMPSISSNPVFKYDLGIEIEGKFHAKIHRDSLKPNEY |
2ZGY Chain:A ((79-296)) | ------------------------------------------------------------------------------------------------------------VVAVHHALLTSGLPVSEVDIVCTLPLTEYYDRNNQPNTENIERKKAN-----FRKKITLNGGDTFTIKDVKVMPESIPAGYEVLQEL--------DELDSLLIIDLGGTTLDISQVMG---------KLSGISKIYGDSSLGVSLVTSAVKDALSLA-RT----KGS----S--------------------------------YLADDIIIHRKD---------------NNY--L-K--QRI--NDENK-ISIVTEAMNEALRKLEQ----RVLNTLNE----FSGYTHVMVIGGGAEL--ICDAVKKHTQIRDERFFKTNNSQYDLVNGMYLIGN--------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZGY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -38867 for 1537 contacts (-25.3/contact) +
2D Compatibility (PS) -22609 + (NN) -8039 + (LL) 18068
1D Compatibility (HY) 400 + (ID) 1150
Total energy: -52197.0 ( -33.96 by residue)
QMean score : 0.394
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