Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDFLNDHINVFGLIAALVILVLTIYESSSLIKEMRDSKSQGELMENGHLIDGIGEFANNVPVGWIASFMCVIVWAFWYFFFGYPLSSFSQIGQYNEEVKAHNQKFEAKWKHLGQKELVDMGQGIFLVHCSQCHGITADGLHGSAQNLLRWDKEEGIMDTIKHGSKGMDYPAGEMPAIEMDEKDAKAIASYVMAELSSVKK--TKNPQLIDKGKELFESMGCAGCHGNDGKGLQENQVFAADLTTYGT---ESFLRNILTHGKKG-------------NIGRMPSFKYKNFSDLQVKALVEFIKSLKPLED |
| 3CP5 Chain:A ((9-123)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DPEALAAEIGP-VKQVSLGEQIDAALAQQGEQLFNT-YCTACHRLDERFI------GPALRDVTKRRGPVYIMNVMLNPNGMIQRHPVMKQLVQEYGTMMTDM---ALSEEQARAILEYLRQVAENQ- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CP5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15328 for 670 contacts (-22.9/contact) +
2D Compatibility (PS) -10488 + (NN) -5330 + (LL) 13596
1D Compatibility (HY) -6800 + (ID) 950
Total energy: -25300.0 ( -37.76 by residue)
QMean score : 0.520
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