Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKQRTLSIIKPDALKKKVVGKIIDRFESNGLEVVAMKRLHLSVKDAENFYAIHRERPFFKDLIEFMVSGPVVVMVLEGKDAVAKNRELMGATDPKLAQKGTIRADFAESIDANAVHGSDSLENAHNEIAFFFAAREF
3NGU Chain:B ((4-137))
--ERTFIAVKPDGVQRGLVGEIIARFERKGYKLVALKILQPTTEQAQGHYKDLCSKPFFPALVKYFSSGPIVCMVWEGKNVVKSGRVLLGATNPADSQPGTIRGDFAVDVGRNVCHGSDSVESAEREIAFWFKADEI
General information:
TITO was launched using:
RESULT:
Template:
3NGU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -62667 for 1023 contacts (-61.3/contact) +
2D Compatibility (PS) -14178 + (NN) -1138 + (LL) 272
1D Compatibility (HY) -12400 + (ID) 3100
Total energy: -93211.0 ( -91.12 by residue)
QMean score : 0.520
(partial model without unconserved sides chains):
PDB file :
Tito_3NGU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NGU-query.scw
PDB file :
Tito_Scwrl_3NGU.pdb
: