Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTFEILKHLQADAIVLFMKVHNFHWNVKGTDFFNVHKATEEIYEGFADMFDDLAERIVQLGHHPLVTLSEAIKLTRVKEETKTSFHSKDIFKEILEDYKHLEKEFKELSNTAEKEGDKVTVTYADDQLAKLQKSIWMLEAHLA
3KWO Chain:A ((4-147))
MSVTKQLLQMQADAHHLWVKFHNYHWNVKGLQFFSIHEYTEKAYEEMAELFDSCAERVLQLGEKAITCQKVLMENAKSPKVAKDCFTPLEVIELIKQDYEYLLAEFKKLNEAAEKESDTTTAAFAQENIAKYEKSLWMIGATLQ
General information:
TITO was launched using:
RESULT:
Template:
3KWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35766 for 1064 contacts (-33.6/contact) +
2D Compatibility (PS) -15725 + (NN) -10804 + (LL) 0
1D Compatibility (HY) -10800 + (ID) 2850
Total energy: -75945.0 ( -71.38 by residue)
QMean score : 0.650
(partial model without unconserved sides chains):
PDB file :
Tito_3KWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KWO-query.scw
PDB file :
Tito_Scwrl_3KWO.pdb
: