Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTPHINAKIGDFYPQCLLCGDPLRVSYIAKNFLQDAKEITNVRNMLGFSGKYKGKGISLMGHGMGIASCTIYVTELIKTYQVKELLRIGTCGAISPKVGLKDIVMATGASTDSKTNRVRFLNHDLSATPDFELSLRAYQTAKRLGIDLKIGNVFSSDFFYSFETHAFGLMAQYNHLAIEMEAAGLYATAMELNAKALCLCSVSDHLITKEALSPKERIESFDNMITLALEMMS
3OOE Chain:C ((2-230))
-TPHINAEMGDFADVVLMPGDPLRAKYIAETFLEDAREVNNVRGMLGFTGTYKGRKISVMGHGMGIPSCSIYTKELITDFGVKKIIRVGSCGAVLPHVKLRDVVIGMGACTDSKVNRIRFKDHDFAAIADFDMVRNAVDAAKALGIDARVGNLFSADLFYSPDGEMFDVMEKYGILGVEMEAAGIYGVAAEFGAKALTICTVSD------------RQTTFNDMIKIALESVL
General information:
TITO was launched using:
RESULT:
Template:
3OOE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -184918 for 1895 contacts (-97.6/contact) +
2D Compatibility (PS) -22648 + (NN) -5287 + (LL) 1172
1D Compatibility (HY) -24400 + (ID) 6000
Total energy: -242081.0 ( -127.75 by residue)
QMean score : 0.538
(partial model without unconserved sides chains):
PDB file :
Tito_3OOE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OOE-query.scw
PDB file :
Tito_Scwrl_3OOE.pdb
: