Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVAPSLLSADFMHLAKEIESV--SNADFLHVDVMDGHYVPNLTMGPVILENVTQM-SQVPLDVHLMVENASFFVELFAPLNPQIISIHAENEKHPHRVLQLIKSSGITPGIVLNPHTHEESIKYLLESVGLVLLMSVNPGFGGQKFLDLVLEKCLKVKELIKRYNPSCLLEVDGGVNDKNIFELQQAGVDVVVSGSYIFESKDRKLAIEGLQNVRQPLA
3INP Chain:A ((28-244))
IQINPSILSADLARLGDDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYGITAGMDVHLMVKPVDALIESFAKAGATSIVFHPEASEHIDRSLQLIKSFGIQAGLALNPATGIDCLKYVESNIDRVLIMSVNPGF--QKFIPAMLDKAKEISKWISSTDRDILLEIDGGVNPYNIAEIAVCGVNAFVAGSAIFNSDSYKQTIDKMRDELNKV-
General information:
TITO was launched using:
RESULT:
Template:
3INP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -157862 for 1793 contacts (-88.0/contact) +
2D Compatibility (PS) -23196 + (NN) -12921 + (LL) -484
1D Compatibility (HY) -19200 + (ID) 4500
Total energy: -218163.0 ( -121.67 by residue)
QMean score : 0.572
(partial model without unconserved sides chains):
PDB file :
Tito_3INP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3INP-query.scw
PDB file :
Tito_Scwrl_3INP.pdb
: