Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPKRMKCFSQKWLVFFVTHWLLLASLSHAKMAFESNIDTKALEAFGVNASFLSQMPGALKKVNKEEEWKKLVKRFDVNYQFIPIIKNMLIGASVPQEFLF-LAMAESKFSSRAYS-RKKAVGIWQFMPSTAKEL--------GLKVNHYIDERRDPIKSTQAAIAYLKRLYKQT----GEW---YLVAMAYNYGLRKVQNAIKAAGTSDIKVLLDEDKKYLPKETREYIRSILSLALKFNSLDNLKDKEYLLNRGARVSLVGVPFKRHTSLVQVAKNLNLSLETLKSYNHQFRYNILPSKDPTYTIYIPYEKLALFKQRQLKQNKNAQANPKSPFITHVVLPKETLSSIAKRYQVSISSIQLANNLKDSNIFIHQRLIIPTNKKLLATREF |
| 3BKH Chain:A ((101-221)) | -----------------------------------------------------------------------------------VMNAVENATGVRSQLLLTFASIESAFDYEIKAKTSSATGWFQFLTGTWKTMIENYGMKYGVLTDPTGALRKDPRISALMGAELIKENMNILRPVLKREPTDTDLYLAHFFGPGAARRFLTTGQNELAATHFPKEAQANPSIFYNKDGSPKTIQEVYNLMDGKVAAHRK-------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BKH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -49229 for 738 contacts (-66.7/contact) +
2D Compatibility (PS) -11197 + (NN) -2773 + (LL) 16852
1D Compatibility (HY) -2000 + (ID) 1000
Total energy: -49347.0 ( -66.87 by residue)
QMean score : 0.395
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