Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRTIDSSSKKDGFRMPGEFEKHAGCYIIWPERP----D-----N--WR--LGAKPAQKAFVDVATAISH-FEPVTVVASSSQ--YV----NAR-------------------------------------YMLSDEIRVV------------EMDNDDAWVRDSGPTFVVNDSGDVRGVDWSFNSWGGLVDGLYFPWDKDDQVAQKICELE-R---KDRYR--LADFVLEGGSIHVDGEGTLVTTEECLLSEGRNPQLSKQQIEMVLKEYL------NLEKIIWLKRGIYLDETNGHVDNIFNYVRPGVVALAWTDDETDPQ--YEIS------------KECFDILSNETDAKGRKLEVHKINVPKPILITDEESKGVDAVEGTLPREEGDRLAASYINYYTAN-GGVIFPLFGDPNDELAREKLQQLYPNCEVVGVKAREILLGGGNIHCITQQVPR |
| 1S9R Chain:A ((7-405)) | --------KFKGIHVYSEIGELESVLVHEPGREIDYITPARLDELLFSAILESHDARKEHKQFVAELKANDINVVELIDLVAETYDLASQEAKDKLIEEFLEDSEPVLSEEHKVVVRNFLKAKKTSRELVEIMMAGITKYDLGIEADHELIVDPMPNLYFTRDPFASV---GNG---VTIHYMR-Y--------KVRQRETLFSRFVFSNHPKLINTPWYYDPSLKLSIEGGDVFIYNNDTLVVGVS-----ER----TDLQTVTLLAKNIVANKECEFKRIVAINVP--KWTNLMHLDTWLTMLDKDKFLYSPIANDVFKFWDYDLVNGGAEPQPVENGLPLEGLLQSI---INKKPVLIPIAGEGASQM-----------------EIERETHFDGTNYLAIRPGVVIGYSRNEK----TNAALEA--AGIKVLPFHGNQLSLGMGNARCMSMPLSR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1S9R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -32774 for 2641 contacts (-12.4/contact) +
2D Compatibility (PS) -32965 + (NN) -19618 + (LL) 2928
1D Compatibility (HY) -11600 + (ID) 2300
Total energy: -96329.0 ( -36.47 by residue)
QMean score : 0.309
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