Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LKKWKRDHLGMVMGILNVTPDSFSDGGKYMQ-VEEAVARALQMAE-----DGAAIIDVGGISTRPGFSEVTPDEELARIIPVIKAVRTKL----PDIWISVDSWRAEVAEQAILAGADMINDQWGAKKEPKIAEVAAKY-DVPICLMHNRENAQY-------D----------------------------NFLEDVKKDLLESIAIAKAASVPDEHIILDPGFGFVKTPAQNLEVLRRIDEIVA----------------LGYEVLLGTSRKSTIGLVLGTT-PGDRMEGTGATTVYGFSKGCTITRVHDVLPIARMVRMTDAITGKLDITNL |
| 2BMB Chain:A ((222-544)) | ------VSPTYIMAIFNATPDSFSDGGEHFADIESQLNDIIKLCKDALYLHESVIIDVGGCSTRPNSIQASEEEEIRRSIPLIKAIRESTELPQDKVILSIDTYRSNVAKEAIKVGVDIINDISGGLFDSNMFAVIAENPEICYILSHTRGDISTMNRLAHYENFALGDSIQQEFVHNTDIQQLDDLKDKTVLIRNVGQEIGERYIKAIDNGVKRWQILIDPGLGFAKTWKQNLQIIRHIPILKNYSFTMNSNNSQVYVNLRNMPVLLGPSRKKFIGHITKDVDAKQRDFATGAVVASCIGFGSDMVRVHDVKNCSKSIKLADAIYKGL----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BMB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -122372 for 2165 contacts (-56.5/contact) +
2D Compatibility (PS) -29064 + (NN) -21254 + (LL) 900
1D Compatibility (HY) -16400 + (ID) 4500
Total energy: -192690.0 ( -89.00 by residue)
QMean score : 0.481
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