Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKELLTFPKDFWWGSAWSAEQAEGR-GDTGKAKTVWEHWFETEPNRFYEGVGSEITTDHFNRYKEDVQWMKKTGQNSFRISISWARMFPDDGVGEVNQKAIAFYRDLLTEMNENGVKPFANLYHFDMPVALQDAGGWESREVVDAYVHFADTCFKEFGDLVYHWFTFNEPLGPILGGYLEGFHYPNQIDFKRGTQAGFNTILAHTLAIKAFKKINLS-SKIGVILNLSPTYPRSQNEYDLEAAEICDAFYTRSFLDPMVKGTFPEKLVEIMREYDQMPEY-TEEDLTIIKENTAQILGLNYYEPRRVKARLTAINEKSPFLPDWFFEPHNMPGKRMNIYRGWEIYERGIYDLCIDIRDNYGNIESFISENGMGVANEERFLNEEGQIQDDYRIQFVKDHLAYVHQAIAEGCDIKGYHLWTFIDCWSWINAYKNRYGLVSLDVETGKRTMKKSGEFYKKMSDMNGFEYETSKLVGTKREETTNG |
4HZ8 Chain:A ((5-442)) | ------FPEGFLWGAATSSYQIEGAWNEDGKGESIWDR-FTRIPGKIKNGDSGDVACDHYHRYEQDLDLMRQLGLKTYRFSIAWARIQPDSSR-QINQRGLDFYRRLVEGLHKRDILPMATLYHWDLPQWVEDEGGWLSRESASRFAEYTHALVAALGDQIPLWVTHNEPMVTVWAGYHMGLFAPGLKDPTLGGRVAHHLLLSHGQALQAFRALSPAGSQMGITLNFNTIYPVSAEPADVEAARRMHSFQNELFLEPLIRGQYNQA---TLMAYPNLPEFIAPEDMQTISAPI-DFLGVNYYNPMRVKS--------SPQPPGIEVVQVESPVTAM----GWEIAPEGLYDLLMGITRTYGKLPIYITENGAAFDDQP---DQSGQVNDPQRVGYFQGHIGAARRALADGVDLRGYYAWSLLDNFEWAEGYSKRFGIIYVDFETQQRTLKQSAQWYRDVIANNGL------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4HZ8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -175295 for 3904 contacts (-44.9/contact) +
2D Compatibility (PS) -46105 + (NN) -17939 + (LL) 3728
1D Compatibility (HY) -32000 + (ID) 7350
Total energy: -274961.0 ( -70.43 by residue)
QMean score : 0.501
|
|
|