Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKDIDWSNLGFSYIKTDKRYISYWKD-GEWDEGALTEDNTLHISEGSTALHYGQQCFEGLKAYRCKDGSINLFRPDRNAARIQKSCERLLMPHIPTEKFIDAVMQVVRANEEFVPPYGTGATLYLRPFVIGVGDNIGVHAAPEYIFSVFCSPVGPYFKGGMAPTNFIVS-DFDRAAPNGTGAAKVGGNYAASLLPGQAAKERNFGDCIYLDP--ATHTKIEEVGSANFFGITKD---DKFVTPYS-PSILPSITKYSLLYLAEHRLGLEAVEGDVYIDKLDE------FKEAGACGTAAVITPIGGIQTKDDFHVFHSETEVGPVTKRLFDELCGIQFGDVEAPEGWIYKVK |
| 3DTG Chain:A ((30-371)) | ------LANPGFGKYYTDHMVSIDYTVDEGWHNAQVIPYGPIQLDPSAIVLHYGQEIFEGLKAYRWADGSIVSFRPEANAARLQSSARRLAIPELPEEVFIESLRQLIAVDEKWVPPAGGEESLYLRPFVIATEPGLGVRPSNEYRYLLIASPAGAYFKGGIKPVSVWLSHEYVRASPGGTGAAKFGGNYAASLLAQAQAAEMGCDQVVWLDAIERR--YVEEMGGMNLFFVFGSGGSARLVTPELSGSLLPGITRDSLLQLATD-AGFAVEERKIDVDEWQKKAGAGEITEVFACGTAAVITPVSHVKHHDGEFTIA-DGQPGEITMALRDTLTGIQRGTFADTHGWMARL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DTG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -170290 for 2745 contacts (-62.0/contact) +
2D Compatibility (PS) -35382 + (NN) -10638 + (LL) 528
1D Compatibility (HY) -25200 + (ID) 6650
Total energy: -247632.0 ( -90.21 by residue)
QMean score : 0.459
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