Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLRLQFHKKLPFHDLNIDYTFEKPVTAMMGASGSGKSTLFQCVSGLKSIDGGIIEFDGTPWDDSNISLHLPVTERKVGYLFQNLALFPNMNVYENIAFGLKVKKKKKKEQAEIQQQVRKMSDYLQISHLLYSSVQKLSGGEKQRVAMARAMITEPKLLLLDEPFNGLDEETRLICMKLVGQMAKDFHIPVIFVTHYASEAEMMTEEILVMREGRLEKRKS
2OLK Chain:C ((49-235))
---------------------EGEVVVVIGPSGSGKSTFLRCLNLLEDFDEGEIIIDGINLKAKDTNLN--KVREEVGMVFQRFNLFPHMTVLNNITLAPMKVRKWPREKAEAKAM--ELLDKVGLKDKAHAYPDSLSGGQAQRVAIARALAMEPKIMLFDEPTSALDPEMVGEVLSVMKQLANE-GMTMVVVTHEMGFAREVGDRVLFMDGG-------
General information:
TITO was launched using:
RESULT:
Template:
2OLK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81223 for 1467 contacts (-55.4/contact) +
2D Compatibility (PS) -20371 + (NN) -7299 + (LL) 2760
1D Compatibility (HY) -14000 + (ID) 3200
Total energy: -123333.0 ( -84.07 by residue)
QMean score : 0.498
(partial model without unconserved sides chains):
PDB file :
Tito_2OLK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OLK-query.scw
PDB file :
Tito_Scwrl_2OLK.pdb
: