Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----VHNPNLFNTLKQNEYTLPKDPNTSNEIIDTMLSYL--SSTDSELRDNIAYN-----IFSEWLVVQDNLTTEQKMRIYNYAVNKNNLLFKINIIDSDAVFQRSFLALIIALLLENNKVHNFLTDSEIRETLNLLIELLKNEKNTHSFIEEKGWAHCIAHTADALDELIYQRTISEIDVKKIMTTIAFFYKTNTKMLTGEEDE--RLSNILITALFEQKISNEEVKNWLISISETIPSYLPEIPLINIKQFTQTLLIKLTVLNYDVDFSLFPIVTRYIRKNDDNSTNKKAL-- |
| 1AER Chain:A ((1-211)) | AFLGDGGDVSFSTRGTQNWTVERLLQAHRQLEERGYVFVGYHGTFLEAAQSIVFGGVRAAIWRGFYIAGD------PALAYGYAQDQ----------EPDAR-GRIRNGALLRVYVPRSSLPGFYRTSLTLAA---------------------------PEAAGEVERLIGHPLPLRLD-----------------AITGPEEEGGRLETILGWPLAER--------------TVVIPSAIPTDP---------------RNVGGDLDPSSIPDKEQAISALPDYASQPGKPPR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1AER.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14722 for 1422 contacts (-10.4/contact) +
2D Compatibility (PS) -19063 + (NN) 7743 + (LL) 8552
1D Compatibility (HY) -3600 + (ID) 2050
Total energy: -23140.0 ( -16.27 by residue)
QMean score : 0.109
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