Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LTTIIAFIFVFGLIVFFHELGHFLFAKRAGIMVKDFSIGFGPKIFAYRKKETQYTIRLLPIGGYVRMAGEDGEEIELKPGYRVGLELTPEETVSKIIVNGKDQYVNAQPIEVSLCDLEKELFIEGYEDYDDTKKVRYQVERDALVIDGKIETMITPYDRSFNAKSLGNRAMTIFAGPLFNFILAILIFTALAFVQGGVPSTDNTLGNVLPDGAAAEAGLKKGDEVLSINGKETKSWTDIVQN-VSENPGKTLDFKIERDGKTQDIDVKPATQK-----ENGKDVGKIGVETPMDSSFTAKITNGFTQTWNWIVQIFTILGNMFTGGFSLDMLNGPVGIYTSTQQVVQYGFMTVLNWTAVLSINLGIVNLLPLPALDGGRLMFFLYELVRGKPIDPKKEGIIHFAGFALLMVLMILVTWNDIQRAFF |
| 2ZPL Chain:A ((3-94)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VRPVVGEIAANSIAAEAQIAPGTELKAVDGIETPDWDAVRLQMVDKIGDESTTITVAPFGSDQRRDVKLDLRHWAFEPDKEDPVSSLGIRPR-------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZPL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 7615 for 576 contacts (13.2/contact) +
2D Compatibility (PS) -9157 + (NN) -3267 + (LL) 25252
1D Compatibility (HY) -3600 + (ID) 950
Total energy: 15893.0 ( 27.59 by residue)
QMean score : 0.591
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