Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSGLTKIEIITRPNRFHLFQKELAKIGVSGLTVTKALGTGLEKGFIELYRGTKKESNIHERMKIEIVVSTVPVEDVLRVVKETLRTGEPGDGKVFIYPLAEVVKISTGETGIDALQDKPSK
2O66 Chain:A ((11-121))
-SKFYKVEAIVRPWRIQQVSSALLKIGIRGVTVSDVRGFG--------------EDKFVAKVKMEIVVKKDQVESVINTIIEGARTGEIGDGKIFVLPVSDVIRVRTGERG----------
General information:
TITO was launched using:
RESULT:
Template:
2O66.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54391 for 615 contacts (-88.4/contact) +
2D Compatibility (PS) -11082 + (NN) -7469 + (LL) 1648
1D Compatibility (HY) -8800 + (ID) 2050
Total energy: -82144.0 ( -133.57 by residue)
QMean score : 0.605
(partial model without unconserved sides chains):
PDB file :
Tito_2O66.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2O66-query.scw
PDB file :
Tito_Scwrl_2O66.pdb
: