Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLGIMGTNWITDS-FIEGAINSGEWNLTAVYSRTEEKARAFGEKYGELTYFTDIEEMGKSDALDAVYIASPNALHYQHAVSLLKNKKHVIVEKPIFSTVAELEHAHQIARENNVFLFEAARHIQEPNFKRLQENIE--KVGTIHGATLAYMKYSSRYDQVLNGEEPNIF-SLKFSGGSIVDLGVYPLYSAITLFGE-PVKATYFATKL-PTGVDGLGPIILEYPTF-NITIIQGKNSQSFLPSEIYGQKGTLIVDPLTGIEK-----ITFYDNATKEETELAGPVVANDMQFEAAEFARIIEQSDRDTYEYLADLSLKVLRVSNELRHQNDIWFDAEK |
| 3RC1 Chain:A ((28-348)) | IRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERFGG-EPVEGYPALLERDDVDAVYVPLPAVLHAEWIDRALRAGKHVLAEKPLTTDRPQAERLFAVARERGLLLMENFMFLHHPQHRQVADMLDEGVIGEIRSFAASFTIPPKP--------QGDIRYQADVGGGALLDIGVYPIRAAGLFLGADLEFVGAVLRHERDRDVVVGGNALLTTRQGVTAQLTFGMEHAYTNNYEFRGSTGRLWMNRVFTPPATYQPVVHIE-RQDHA-E-QFVLPAHDQFAKSIRAFAQAVLSGEH--PREWSEDSLRQASLVDAVRTGARDIY---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3RC1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -143980 for 2627 contacts (-54.8/contact) +
2D Compatibility (PS) -33697 + (NN) -16325 + (LL) 876
1D Compatibility (HY) -7200 + (ID) 2900
Total energy: -203226.0 ( -77.36 by residue)
QMean score : 0.434
|
|
|