Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLNFLYANMQKDIDSVEKELKKALSGAAADTTSAAALHLL-----------EAGGKRIRPMFVCLSARLAANADFNAVKNASVAIELIHMASIVHDDVVDDADLRRGRETIKSKWGNHIAMYTGDFLFAKSLEYMTEIKDV---AAHKMLSHVTVELSTGEIEQLKDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGVVSGQSEADYQKLYRFGYYVGMAFQITDDVLDFVGTEKELGKPAGEDLRQGNVTLPVFFAMEDPFLK-KRISQI-TE--------ETPAEEIAVLVEEVKK-TGAKQAEDVATTYLKKAVEILDSLPQV-PELKPLKQIVRVLDKRNY |
3NF2 Chain:A ((5-341)) | -----VTALLERGRTLATPVLRAAVDR-LAPPMDTVAAYHFGWIDAQGNPADGDGGKAVRPALAVLSAEVTGA-APEVGVPGAVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKVHGPAQAILVGDALFALANEVLLELGTVEAGRATRRLTKASRSLIDGQAQDISYEHRDRVSVEECLEMEGNKTGALLACASSIGAVLGGADERTADTLEKYGYHLGLAFQAVDDLLGIWGDPDATGKQTWSDLRQRKKSLPVVAALAAGGAASERLGEILTADAKASDFANFSEEEFAARAALIEEAGGREWTADEARRQHTIAIEALDAVDMPDRVRDRFTALADFVVV--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NF2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -150309 for 2653 contacts (-56.7/contact) +
2D Compatibility (PS) -33592 + (NN) -18294 + (LL) 900
1D Compatibility (HY) -8400 + (ID) 4300
Total energy: -213995.0 ( -80.66 by residue)
QMean score : 0.524
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